Choose program to use and database to search:
blastn (query NT : db NT)
blastp (query AA : db AA)
blastx (query NT : db AA)
tblastn (query AA : db NT)
tblastx (query NT : db NT 6 frames)

Program Database

Enter query sequence below in FASTA format

Or load it from disk

The query sequence is filtered for low complexity regions by default.
Filter Low complexity Mask for lookup table only

Expect    Matrix Perform ungapped alignment

Graphical Overview    Alignment view

Descriptions    Alignments Color schema